This database is a repository for sequence, structural, and mutation data for homologs of the LacI/GalR transcription regulators. The database was compiled by the Swint-Kruse and Teichmann Laboratories.
Get started by downloading the database using the buttons above. The SQL format is recommended because it will allow you to perform queries on the data. A tab-delimited format for each table in the database is also available.
You can import the SQL formatted file into a local MySql database using the following instructions [External links]:
Text (Tab-Delimited) formatted tables can be read in a text editor (e.g. Notepad++ or spreadsheet software (e.g. Microsoft Excel).
Please cite the following two article for projects using allorep:
Sousa FL, Parente DJ, Shis DL, Hessman JA, Chazelle A, Bennett MR, Teichmann SA, Swint-Kruse L. AlloRep: A Repository of Sequence, Structural and Mutagenesis Data for the LacI/GalR Transcription Regulators. J Mol Biol. 2016 Feb 22;428(4):671-8. PMID 26410588
Sousa FL, Parente DJ, Shis DL, Hessman JA, Chazelle A, Bennett MR, Teichmann SA, Swint-Kruse L. Data on publications, structural analyses, and queries used to build and utilize the AlloRep database. Data Brief. 2016 Jul 9;8:948-57. PMID 27508249
PMIDs for publications describing the individual LacI/GalR data are included in the database.